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Species belonging to selected taxon:

Ciona intestinalis



ABOUT THIS RECORD

ID: MNEST005571
species: Ciona intestinalis
miRNA family: miR-4275
source: miRNEST

Taxonomy by NCBI:
Ciona intestinalis Ciona Cionidae Phlebobranchia Enterogona Ascidiacea Tunicata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCAATTACCACTTCTTCATTG

miRNA*
ATGAGGTGTAGTCAAATGAGC

mismatches: 3
bulges: 2

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pre-miRNA
CATTTCTTGGCTCAATTACCACTTCTTCATTGTTGTATGTAGTTTTATCAAAAACAAACTGCCCGCCTTTAAAATCACTTCCATAGTCTGCTANATAGAG
TAATGAGGTGTAGTCAAATGAGCCATATTGT


dot-bracket secondary structure
.......(((((((.((((.((..((((((((((.(((.((((.((((..................................))))...)))).))).))
)))))))).)).)).)).)))))))......



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|Q5XGE0|CQ101_XENTR: 0.00001

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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